I am trying to work on a linux based external server. I need to install Homebrew and anaconda. So, I have installed anaconda as usual in my home directory. But when I tried to install homebrew, I get the following errors:
fatal: packfile .git/objects/pack/pack-9d2d97f367d3ebfa65a3b708b2d87333a8eb2bf0.pack cannot be mapped: Cannot allocate memory
error: https://github.com/Homebrew/homebrew-core did not send all necessary objects
Failed during: git fetch --force origin refs/heads/master:refs/remotes/origin/master
Ok, then I tried to install git using conda. However, I have encountered another error, which is:
libgcc_s.so.1 must be installed for pthread_cancel to work
I tried to install the GCC library using this link How do I compile and run GCC 4.9.x?
But then again, I encountered the problem of “cannot allocate memory”. As I am working on an external cluster with many CPUs, I assume I have enough memory and space because I am working with many genomes.
Also, I cannot used sudo as I am not authorised to do that. I also tried to get the apt-get command but it shows that apt-get command not found.
Can anybody please help me to solve these problems?
Thank you.